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Getting to Know California Payroll Deductions: A Complete Guide

Getting to Know California Payroll Deductions: A Complete Guide

Jul-24-2025

California's tax laws and labor rules make payroll deductions a special complexity. To guarantee compliance and optimize benefits, both employers and employees must be aware of the details. This thorough blog will explain California's required and optional payroll deductions and how they differ from federal requirements.

Payroll Deductions: What Are They?

The amounts taken out of an employee's gross pay in California to cover taxes, benefits, and other costs are known as payroll deductions. These deductions are further divided into two categories: mandatory (mandated by law) and optional (employee-selected).

Mandatory Payroll Deductions in California

  • Federal Income Tax: Federal income tax is withheld using the federal tax bracket system based on the employee's W-4 form. This system applies at the federal level, including in California.
  • State Income Tax: California’s state income tax is progressive, with rates ranging from 1% to 13.3% based on income level and filing status. Unlike some states that use a flat tax rate, California requires employers to accurately calculate income-based withholdings for each employee to ensure proper compliance with state tax laws.
  • California State Disability Insurance (SDI): One of the unique features of California payroll is the required withholding for State Disability Insurance (SDI), which offers short-term disability benefits to employees who are medically unable to work because of illness, injury, or pregnancy. As of 2025, the SDI rate is 1.2% of the employee’s gross pay, and there is no wage cap. All wages are subject to SDI. This withholding is vital in California, but it is often missed in other states.
  • California Paid Family Leave (PFL): As part of the SDI program, PFL allows employees to take up to eight weeks of partially paid leave to care for a seriously ill family member or bond with a new child. In 2025, benefits cover 70–90% of the employee’s weekly wages, up to a maximum of $1,681 per week. Since PFL is funded through SDI, there is no separate deduction.
  • Social Security and Medicare (FICA): The Federal Insurance Contributions Act requires that funds for Social Security and Medicare be deducted by California employers like everywhere else in the states. Medicare has a rate of 1.45% with an additional 0.9% levied on high income, and Social Security has a levy amounting to 6.2% for wages up to $168,600.
  • Wage Garnishments: In California, employers are legally obligated to take money out of an employee's paycheck if the employee has a court-ordered wage garnishment (such as alimony or child support). Employee protection is increased by California's wage garnishment restrictions, which are often lower than federal standards.

Voluntary Payroll Deductions in California

In addition to the mandatory deductions, employees in California may opt for various voluntary deductions for benefits or savings programs. These deductions may include:

  • Health Insurance Premiums: Employees can choose to have deductions for medical, dental, or vision insurance premiums. In California, these premiums are typically deducted pre-tax, reducing the employee’s taxable income.
  • Union Dues: Employees who are part of a union will have the dues deducted from their paychecks, usually post-tax. Labor laws in California are strong, and union membership is highly prevalent in professions like education, healthcare, and public service.
  • Retirement Contributions (401(k), 403(b), etc.): Employees can contribute to employer-sponsored retirement plans such as a 401(k) or 403(b), etc. These contributions are often made on a pre-tax basis, offering immediate tax benefits. California also offers the CalSavers program for employees without access to an employer-sponsored plan.
  • Flexible Spending Accounts (FSAs) and Health Savings Accounts (HSAs): Contributions to FSAs and HSAs, which are used for medical expenses or dependent care, are deducted pre-tax, providing employees with significant tax savings.
  • Commuter Benefits: California’s Commuter Benefits Program allows employees in high-traffic regions, like Los Angeles and San Francisco, to deduct up to $315/month in pre-tax dollars (2025 limit) for qualified public transportation and parking expenses. This IRS-approved benefit (Section 132(f)) helps reduce taxable income and offset commuting costs, making it a valuable perk for urban employees. In some air quality districts, such as those under BAAQMD Rule 14-1, these programs are mandatory for large employers.

Pre-Tax vs. Post-Tax Deductions in California

Understanding pre-tax and post-tax deductions has been important in maximizing tax in California:

Pre-Tax Deductions:
Pre-tax deductions lower an employee's taxable income, which can reduce the overall tax burden while increasing take-home pay.
Post-tax Deductions:
This is paid after tax has been deducted. This might include: union dues, charitable contributions, or voluntary benefits such as life insurance.

How Do Payroll Deductions Work in California?

With the additional complexity of SDI and California's state income tax rates, payroll deductions in California operate similarly to those in other states. To maintain compliance, employers must use payroll systems that can manage the range of state-specific deductions.

Here’s an example of payroll deductions for an employee in California:

Gross Pay: $5,000
Federal Income Tax: $450
State Income Tax (CA): $300
Social Security and Medicare (FICA): $383
SDI (1.2%): $60
Health Insurance Premium (pre-tax): $200
401(k) Contribution (pre-tax): $250
Net Pay: $3,357

In this example, the employee’s gross pay is reduced by federal and state taxes, as well as the unique SDI deduction, resulting in a net pay of $3,357 after all deductions.

The federal and California state income tax figures in this example are estimates. Actual amounts vary based on the employee’s W-4 selections, marital status, allowances, and pay frequency.

Employers should use the 2025 IRS Publication 15‑T, Publication 15 (Circular E), and the 2025 California EDD DE 44 (Rev. 51) for the most current withholding tables and rules.

Why Payroll Deductions Matter in California?

Payroll deductions are essential for both employees and employers in California:

For Employees: With their contributions going toward programs such as SDI, California workers benefit from good safety nets, including disability benefits and paid family leave.
For Employers: California employers must carefully track required payroll deductions to remain compliant with state and federal laws, avoid costly penalties, and ensure accurate employee compensation. California's labor laws are some of the most stringent, and failure to withhold the proper taxes or benefit monies could get one into serious penalties and litigation.

Common Payroll Deduction Mistakes in California

Employers must be cautious of several common payroll deduction errors:

Mismanaging SDI Deductions: Employers sometimes overlook or miscalculate the SDI deduction, leading to underpayments or overpayments to the state.
Incorrect State Income Tax Withholding: With California’s progressive tax system, using the wrong withholding rates can lead to costly corrections.
Overlooking Commuter Benefits: In cities like San Francisco and Berkeley, employers are required to offer commuter benefits. Overlooking them can lead to compliance issues under local ordinances.

Conclusion

Payroll deductions in California are complicated because of special regulations like progressive income tax and SDI. Comprehending these deductions is essential for maintaining compliance and providing advantages to both businesses and employees. Employers can accurately manage deductions by employing effective payroll systems and following state-specific requirements.

PayProNext streamlines payroll procedures while guaranteeing adherence to regulations and offering workers legal and financial safeguards.